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After his son Desmond died on 21 December 2012 to prevent the coronal mass ejection from destroying the Earth, William Miles' mourning led him to abandoning the Order and living as a hermit for several months, writing his experiences and knowledge down in a journal. In May 2013, William sent the codex to Gavin Banks, whom he appointed to succeed him as leader of the Assassins.
Upon William's return to the Assassins, following the discovery of the fate of his son's body, an angry Gavin Banks attempted to give the codex back to him in William's secret bunker, claiming to have felt betrayed after William's sudden departure from the Order, and leaving the leadership in Gavin's hands. However, the two reconciled eventually, after Gavin learned the reason for William's absence.